Command line tools

Apollon comes with a set of command line tools for those who do not want or do not need to work with the API. These utilities provide access to the most common use cases, that is, extracting features, training HMMs, training SOMS.

The command line tools, however, cannot replace the API completely. Many thinks like setting HMM hyper parameters are not possible at the moment.

All command line tools are invoked using the master command apollon. Each use case is implemented as a subcommand.

apollon TRACK_FILE FEATURE_PATH [-m --mstates] [-o --outpath]